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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4349949 chr8:10900621 A/G SGK223 chr8:8175258-8244008:- -0.37 -6.23 1.01E-9 Box Plot
THCA rs4351733 chr10:88913389 T/C FAM35B chr10:46897641-46939143:+ 0.37 7.22 2.05E-12 Box Plot
THCA rs4358614 chr6:26803963 T/C ZNF322B chr9:99957633-99961910:- 0.59 10.86 1.05E-24 Box Plot
THCA rs4358840 chr8:11821835 A/G SGK223 chr8:8175258-8244008:- 0.38 6.94 1.32E-11 Box Plot
THCA rs4361565 chr5:49557100 C/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.86 2.51E-14 Box Plot
THCA rs4362951 chr5:46047306 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.16 3.0E-15 Box Plot
THCA rs4363158 chr8:11217284 T/C SGK223 chr8:8175258-8244008:- -0.43 -8.09 4.86E-15 Box Plot
THCA rs4366049 chr8:11398504 A/G SGK223 chr8:8175258-8244008:- -0.33 -6.07 2.66E-9 Box Plot
THCA rs4366508 chr11:77274999 C/T INTS4L1 chr7:64601603-64694600:+ 0.36 6.2 1.2E-9 Box Plot
THCA rs4367307 chr5:46065959 A/G LOC647121 chr1:121260910-121313686:+ -0.38 -8.22 1.98E-15 Box Plot
THCA rs4367597 chr8:11793529 C/T SGK223 chr8:8175258-8244008:- -0.46 -8.54 1.75E-16 Box Plot
THCA rs4367947 chr11:49304012 G/A FOLH1B chr11:89372395-89431886:+ 0.36 6.25 9.13E-10 Box Plot
THCA rs4368352 chr2:101085835 T/C LOC285359 chr3:101431278-101432259:+ 0.33 6.36 4.86E-10 Box Plot
THCA rs4368798 chr6:26593471 A/G ZNF322B chr9:99957633-99961910:- 0.71 14.96 8.8E-42 Box Plot
THCA rs4370277 chr5:46048668 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.25 1.56E-15 Box Plot